Package: chromseq 0.1.3
chromseq: Split Chromosome 'Fasta' File
Chromosome files in the 'Fasta' format usually contain large sequences like human genome. Sometimes users have to split these chromosomes into different files according to their chromosome number. The 'chromseq' can help to handle this. So the selected chromosome sequence can be used for downstream analysis like motif finding. Howard Y. Chang(2019) <doi:10.1038/s41587-019-0206-z>.
Authors:
chromseq_0.1.3.tar.gz
chromseq_0.1.3.zip(r-4.5)chromseq_0.1.3.zip(r-4.4)chromseq_0.1.3.zip(r-4.3)
chromseq_0.1.3.tgz(r-4.4-any)chromseq_0.1.3.tgz(r-4.3-any)
chromseq_0.1.3.tar.gz(r-4.5-noble)chromseq_0.1.3.tar.gz(r-4.4-noble)
chromseq_0.1.3.tgz(r-4.4-emscripten)chromseq_0.1.3.tgz(r-4.3-emscripten)
chromseq.pdf |chromseq.html✨
chromseq/json (API)
| # Install 'chromseq' in R: |
| install.packages('chromseq', repos = c('https://msq-123.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/msq-123/chromseq/issues
Last updated 4 years agofrom:76ec38c79b. Checks:OK: 1 NOTE: 6. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Aug 30 2024 |
| R-4.5-win | NOTE | Aug 30 2024 |
| R-4.5-linux | NOTE | Aug 30 2024 |
| R-4.4-win | NOTE | Aug 30 2024 |
| R-4.4-mac | NOTE | Aug 30 2024 |
| R-4.3-win | NOTE | Aug 30 2024 |
| R-4.3-mac | NOTE | Aug 30 2024 |
Exports:readToListreplaceTextsortListsplitChrsubFasID
Dependencies:
