Package: chromseq 0.1.3
chromseq: Split Chromosome 'Fasta' File
Chromosome files in the 'Fasta' format usually contain large sequences like human genome. Sometimes users have to split these chromosomes into different files according to their chromosome number. The 'chromseq' can help to handle this. So the selected chromosome sequence can be used for downstream analysis like motif finding. Howard Y. Chang(2019) <doi:10.1038/s41587-019-0206-z>.
Authors:
chromseq_0.1.3.tar.gz
chromseq_0.1.3.zip(r-4.7)chromseq_0.1.3.zip(r-4.6)chromseq_0.1.3.zip(r-4.5)
chromseq_0.1.3.tgz(r-4.6-any)chromseq_0.1.3.tgz(r-4.5-any)
chromseq_0.1.3.tar.gz(r-4.7-any)chromseq_0.1.3.tar.gz(r-4.6-any)
chromseq_0.1.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
chromseq/json (API)
| # Install 'chromseq' in R: |
| install.packages('chromseq', repos = c('https://msq-123.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/msq-123/chromseq/issues
Last updated from:76ec38c79b. Checks:7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | NOTE | 99 | ||
| source / vignettes | OK | 176 | ||
| linux-release-x86_64 | NOTE | 104 | ||
| macos-release-arm64 | NOTE | 98 | ||
| macos-oldrel-arm64 | NOTE | 79 | ||
| windows-devel | NOTE | 64 | ||
| windows-release | NOTE | 59 | ||
| windows-oldrel | NOTE | 61 | ||
| wasm-release | OK | 80 |
Exports:readToListreplaceTextsortListsplitChrsubFasID
Dependencies:
